STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXDC2Plexin domain containing 2. (491 aa)    
Predicted Functional Partners:
KLHL25
Kelch like family member 25.
      
 0.543
KIAA1217
KIAA1217.
      
 0.532
AGTRAP
Angiotensin II receptor associated protein.
      
 0.493
SPARCL1
SPARC like 1.
   
  
 0.481
Nrep
Neuronal regeneration related protein.
      
 0.479
ATP11A
ATPase phospholipid transporting 11A.
      
 0.478
TUBGCP3
Tubulin gamma complex associated protein 3.
      
 0.465
CGRRF1
Cell growth regulator with ring finger domain 1.
      
 0.463
HCLS1
Hematopoietic cell-specific Lyn substrate 1.
      
 0.444
FRMD4A
FERM domain containing 4A.
      
 0.442
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.