STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003003annotation not available (81 aa)    
Predicted Functional Partners:
ENSODEP00000018854
annotation not available
   
 0.977
ENSODEP00000021380
annotation not available
   
 0.977
Fau
annotation not available
   
 0.977
EIF3B
Eukaryotic translation initiation factor 3 subunit B.
   
 0.964
LOC101583547
Eukaryotic translation initiation factor 3 subunit C.
   
 0.952
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.943
EIF3D
Eukaryotic translation initiation factor 3 subunit D.
   
 0.942
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
   
 0.942
ENSODEP00000020086
annotation not available
   
 0.936
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
 0.936
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.