STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003070annotation not available (2231 aa)    
Predicted Functional Partners:
PDZD7
PDZ domain containing 7.
    
 0.935
ENSODEP00000003023
annotation not available
 
     0.926
USH2A
Usherin.
     
0.925
ENSODEP00000024513
annotation not available
    
 0.899
ENSODEP00000024569
annotation not available
    
 0.899
FRAS1
Fraser extracellular matrix complex subunit 1.
   
0.890
VEZT
Vezatin, adherens junctions transmembrane protein.
     
 0.886
NPNT
Nephronectin.
     
 0.751
ENSODEP00000011758
annotation not available
     
 0.742
ENSODEP00000012412
annotation not available
     
 0.742
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.