Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CENPT | RTL5 | ENSODEP00000020192 | ENSODEP00000003101 | Centromere protein T. | Retrotransposon Gag like 5. | 0.912 |
ENSODEP00000005901 | ERCC4 | ENSODEP00000005901 | ENSODEP00000003883 | annotation not available | ERCC excision repair 4, endonuclease catalytic subunit. | 0.958 |
ENSODEP00000005901 | MEIOB | ENSODEP00000005901 | ENSODEP00000018780 | annotation not available | Meiosis specific with OB-fold. | 0.989 |
ENSODEP00000005901 | MUS81 | ENSODEP00000005901 | ENSODEP00000024282 | annotation not available | MUS81 structure-specific endonuclease subunit. | 0.913 |
ENSODEP00000005901 | RPA1 | ENSODEP00000005901 | ENSODEP00000012179 | annotation not available | Replication protein A1. | 0.998 |
ENSODEP00000005901 | RTL5 | ENSODEP00000005901 | ENSODEP00000003101 | annotation not available | Retrotransposon Gag like 5. | 0.917 |
ENSODEP00000013973 | ERCC4 | ENSODEP00000013973 | ENSODEP00000003883 | annotation not available | ERCC excision repair 4, endonuclease catalytic subunit. | 0.958 |
ENSODEP00000013973 | MEIOB | ENSODEP00000013973 | ENSODEP00000018780 | annotation not available | Meiosis specific with OB-fold. | 0.989 |
ENSODEP00000013973 | MUS81 | ENSODEP00000013973 | ENSODEP00000024282 | annotation not available | MUS81 structure-specific endonuclease subunit. | 0.913 |
ENSODEP00000013973 | RPA1 | ENSODEP00000013973 | ENSODEP00000012179 | annotation not available | Replication protein A1. | 0.998 |
ENSODEP00000013973 | RTL5 | ENSODEP00000013973 | ENSODEP00000003101 | annotation not available | Retrotransposon Gag like 5. | 0.917 |
ERCC4 | ENSODEP00000005901 | ENSODEP00000003883 | ENSODEP00000005901 | ERCC excision repair 4, endonuclease catalytic subunit. | annotation not available | 0.958 |
ERCC4 | ENSODEP00000013973 | ENSODEP00000003883 | ENSODEP00000013973 | ERCC excision repair 4, endonuclease catalytic subunit. | annotation not available | 0.958 |
ERCC4 | MEIOB | ENSODEP00000003883 | ENSODEP00000018780 | ERCC excision repair 4, endonuclease catalytic subunit. | Meiosis specific with OB-fold. | 0.987 |
ERCC4 | MUS81 | ENSODEP00000003883 | ENSODEP00000024282 | ERCC excision repair 4, endonuclease catalytic subunit. | MUS81 structure-specific endonuclease subunit. | 0.987 |
ERCC4 | RPA1 | ENSODEP00000003883 | ENSODEP00000012179 | ERCC excision repair 4, endonuclease catalytic subunit. | Replication protein A1. | 0.989 |
ERCC4 | RTL5 | ENSODEP00000003883 | ENSODEP00000003101 | ERCC excision repair 4, endonuclease catalytic subunit. | Retrotransposon Gag like 5. | 0.884 |
H6PD | RTL5 | ENSODEP00000016442 | ENSODEP00000003101 | Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase. | Retrotransposon Gag like 5. | 0.840 |
LEO1 | RTL5 | ENSODEP00000010859 | ENSODEP00000003101 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Retrotransposon Gag like 5. | 0.875 |
LIN9 | RTL5 | ENSODEP00000010025 | ENSODEP00000003101 | Lin-9 DREAM MuvB core complex component. | Retrotransposon Gag like 5. | 0.838 |
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