STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8A1ATPase phospholipid transporting 8A1. (1164 aa)    
Predicted Functional Partners:
TMEM30B
Transmembrane protein 30B.
   
 0.978
ENSODEP00000005213
annotation not available
   
 0.976
ENSODEP00000006205
annotation not available
   
 0.976
ENSODEP00000015555
annotation not available
   
 0.976
ENSODEP00000008920
annotation not available
   
 0.969
ATP10A
ATPase phospholipid transporting 10A (putative).
     
0.920
PLN
Phospholamban.
    
 0.918
ATP11A
ATPase phospholipid transporting 11A.
  
  
0.907
ATP11B
ATPase phospholipid transporting 11B (putative).
  
  
0.896
ATP11C
ATPase phospholipid transporting 11C.
  
  
0.894
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.