Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003205annotation not available (208 aa)    
Predicted Functional Partners:
ZC3H13
Zinc finger CCCH-type containing 13.
   
 
 0.907
METTL3
Methyltransferase like 3.
    
 
 0.894
VIRMA
Vir like m6A methyltransferase associated.
   
 
 0.891
ALYREF
Aly/REF export factor.
    
 
 0.845
ENSODEP00000009726
annotation not available
    
 0.842
ENSODEP00000011638
annotation not available
    
 0.842
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.842
ENSODEP00000001251
annotation not available
    
 
 0.790
ENSODEP00000011802
annotation not available
    
 
 0.790
ENSODEP00000000318
annotation not available
    
 
 0.783
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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