STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARMIL3Capping protein regulator and myosin 1 linker 3. (1375 aa)    
Predicted Functional Partners:
MSL2
MSL complex subunit 2.
    
 0.962
MSL3
MSL complex subunit 3.
    
 0.961
ENSODEP00000018699
annotation not available
    
 0.961
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.951
ENSODEP00000025351
annotation not available
   
 0.951
NXF1
Nuclear RNA export factor 1.
   
 0.947
PBRM1
Polybromo 1.
    
 0.933
Arid4a
AT-rich interaction domain 4A.
    
 0.932
MAML1
Mastermind like transcriptional coactivator 1.
    
 0.931
ARID4B
AT-rich interaction domain 4B.
    
 0.911
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.