Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTYH1Tweety family member 1. (450 aa)    
Predicted Functional Partners:
ENSODEP00000007328
annotation not available
     
  0.859
EVC
EvC ciliary complex subunit 1.
     
  0.859
EVC2
EvC ciliary complex subunit 2.
     
  0.859
LENG8
Leukocyte receptor cluster member 8.
      
 0.757
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
      
 0.739
APOE
Apolipoprotein E.
    
   0.624
UNK
Unk zinc finger.
      
 0.620
ALCAM
Activated leukocyte cell adhesion molecule.
      
 0.619
GPR37
G protein-coupled receptor 37.
   
 
 0.599
ENSODEP00000006453
annotation not available
      
 0.596
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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