STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL14EPLADP ribosylation factor like GTPase 14 effector protein like. (152 aa)    
Predicted Functional Partners:
ENSODEP00000019270
annotation not available
    
 
 0.886
ENSODEP00000016870
annotation not available
    
 
 0.837
ENSODEP00000007581
annotation not available
    
 
 0.834
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
 
 0.834
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.800
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
   0.800
PHF7
PHD finger protein 7.
    
 
 0.655
ENSODEP00000024771
annotation not available
    
   0.639
SUOX
Sulfite oxidase.
      
 0.544
ITSN1
Intersectin 1.
      
 0.542
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.