STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBP2Oxysterol binding protein 2. (908 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
    
 
 0.976
VAPB
VAMP associated protein B and C.
    
 
 0.974
OSBP
Oxysterol binding protein.
    
   0.950
ENSODEP00000016752
annotation not available
   
 
 0.805
MOSPD2
Motile sperm domain containing 2.
    
 
 0.787
ENSODEP00000008282
annotation not available
    
 
 0.732
DMTN
Dematin actin binding protein.
   
    0.722
NPRL3
NPR3 like, GATOR1 complex subunit.
   
 
 0.710
PLEKHA3
Pleckstrin homology domain containing A3.
    
 
 0.695
LZTS1
Leucine zipper tumor suppressor 1.
      
 0.691
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.