STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003438annotation not available (164 aa)    
Predicted Functional Partners:
ENSODEP00000025035
annotation not available
  
 0.995
SDHC
Succinate dehydrogenase complex subunit C.
    
 0.902
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 
 0.902
MRPS23
Mitochondrial ribosomal protein S23.
   
    0.868
SUCLG1
succinate-CoA ligase alpha subunit.
  
 
 0.858
ENSODEP00000000930
annotation not available
    
 0.796
ENSODEP00000017798
annotation not available
    
 0.796
ACLY
ATP citrate lyase.
   
 0.688
ENSODEP00000007764
annotation not available
   
 0.667
ENSODEP00000026092
annotation not available
   
 0.667
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.