Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101578289annotation not available (900 aa)    
Predicted Functional Partners:
CLCA2
Chloride channel accessory 2.
     
  0.858
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.762
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.750
UGT3A2
UDP glycosyltransferase family 3 member A2.
   
 0.746
LINGO3
Leucine rich repeat and Ig domain containing 3.
   
  0.732
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.720
MOCS3
Molybdenum cofactor synthesis 3.
   
  0.718
FRAS1
Fraser extracellular matrix complex subunit 1.
   
 0.716
Tonsl
Tonsoku like, DNA repair protein.
   
 0.707
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.702
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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