STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003554annotation not available (348 aa)    
Predicted Functional Partners:
ACO2
Aconitase 2.
  
 0.990
IDH3G
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma.
  
 0.982
IDH3B
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta.
  
 0.982
ENSODEP00000001578
annotation not available
  
 0.974
ENSODEP00000020939
annotation not available
  
 0.974
IDH2
Isocitrate dehydrogenase (NADP(+)) 2.
   
 0.973
OGDH
Oxoglutarate dehydrogenase.
  
 0.972
OGDHL
Oxoglutarate dehydrogenase like.
  
 0.971
IREB2
Iron responsive element binding protein 2.
  
 0.962
ENSODEP00000002834
annotation not available
  
 0.959
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.