STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003564annotation not available (98 aa)    
Predicted Functional Partners:
ENSODEP00000007138
annotation not available
  
 0.946
ENSODEP00000007189
annotation not available
  
 0.946
SUCLG1
succinate-CoA ligase alpha subunit.
  
 0.924
ENSODEP00000017298
annotation not available
    
 0.893
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.885
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.878
ENSODEP00000025035
annotation not available
  
 0.874
ENSODEP00000014545
annotation not available
 
 
 0.873
ENSODEP00000000930
annotation not available
  
 0.863
ENSODEP00000017798
annotation not available
  
 0.863
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.