STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRG1Proline rich and Gla domain 1. (218 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
    
 
 0.587
SLC44A1
Solute carrier family 44 member 1.
      
 0.555
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.480
ABHD4
Abhydrolase domain containing 4.
      
 0.478
CMTM3
CKLF like MARVEL transmembrane domain containing 3.
      
 0.478
TMEM47
Transmembrane protein 47.
      
 0.472
FA2H
Fatty acid 2-hydroxylase.
      
 0.472
RNF34
Ring finger protein 34.
      
 0.459
ENPP2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
      
 0.457
SLC44A3
Solute carrier family 44 member 3.
      
 0.412
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.