TAB2 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

TAB2

TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (693 aa)

Predicted Functional Partners:

IRAK1

0.999

IKBKG

0.999

MAP3K7

0.999

TAB3

0.999

TAB1

0.999

TRAF6

0.999

RIPK1

0.998

TRAF2

0.998

TRAF3

0.991

TRAF5

0.991

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

Export your current network:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IKBKG	IRAK1	ENSODEP00000007932	ENSODEP00000006100	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	Interleukin 1 receptor associated kinase 1.	0.991
IKBKG	MAP3K7	ENSODEP00000007932	ENSODEP00000010376	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	Mitogen-activated protein kinase kinase kinase 7.	0.998
IKBKG	RIPK1	ENSODEP00000007932	ENSODEP00000010259	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	Receptor interacting serine/threonine kinase 1.	0.999
IKBKG	TAB1	ENSODEP00000007932	ENSODEP00000021470	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TGF-beta activated kinase 1 (MAP3K7) binding protein 1.	0.998
IKBKG	TAB2	ENSODEP00000007932	ENSODEP00000003579	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.999
IKBKG	TAB3	ENSODEP00000007932	ENSODEP00000017406	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.998
IKBKG	TRAF2	ENSODEP00000007932	ENSODEP00000021072	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TNF receptor associated factor 2.	0.998
IKBKG	TRAF3	ENSODEP00000007932	ENSODEP00000003198	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TNF receptor associated factor 3.	0.985
IKBKG	TRAF5	ENSODEP00000007932	ENSODEP00000013549	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TNF receptor associated factor 5.	0.993
IKBKG	TRAF6	ENSODEP00000007932	ENSODEP00000023288	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	TNF receptor associated factor 6.	0.999
IRAK1	IKBKG	ENSODEP00000006100	ENSODEP00000007932	Interleukin 1 receptor associated kinase 1.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.991
IRAK1	MAP3K7	ENSODEP00000006100	ENSODEP00000010376	Interleukin 1 receptor associated kinase 1.	Mitogen-activated protein kinase kinase kinase 7.	0.998
IRAK1	RIPK1	ENSODEP00000006100	ENSODEP00000010259	Interleukin 1 receptor associated kinase 1.	Receptor interacting serine/threonine kinase 1.	0.719
IRAK1	TAB1	ENSODEP00000006100	ENSODEP00000021470	Interleukin 1 receptor associated kinase 1.	TGF-beta activated kinase 1 (MAP3K7) binding protein 1.	0.985
IRAK1	TAB2	ENSODEP00000006100	ENSODEP00000003579	Interleukin 1 receptor associated kinase 1.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.999
IRAK1	TAB3	ENSODEP00000006100	ENSODEP00000017406	Interleukin 1 receptor associated kinase 1.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.993
IRAK1	TRAF2	ENSODEP00000006100	ENSODEP00000021072	Interleukin 1 receptor associated kinase 1.	TNF receptor associated factor 2.	0.977
IRAK1	TRAF3	ENSODEP00000006100	ENSODEP00000003198	Interleukin 1 receptor associated kinase 1.	TNF receptor associated factor 3.	0.911
IRAK1	TRAF5	ENSODEP00000006100	ENSODEP00000013549	Interleukin 1 receptor associated kinase 1.	TNF receptor associated factor 5.	0.893
IRAK1	TRAF6	ENSODEP00000006100	ENSODEP00000023288	Interleukin 1 receptor associated kinase 1.	TNF receptor associated factor 6.	0.999