STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003714annotation not available (336 aa)    
Predicted Functional Partners:
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.979
NDEL1
nudE neurodevelopment protein 1 like 1.
  
 
0.972
ENSODEP00000004223
annotation not available
    
 0.930
ENSODEP00000010983
annotation not available
    
 0.930
KIF2A
Kinesin family member 2A.
    
 0.870
KIF5B
Kinesin family member 5B.
    
 0.860
KIF2C
Kinesin family member 2C.
    
 0.857
KIF17
Kinesin family member 17.
     
 0.855
KIF5C
Kinesin family member 5C.
    
 0.849
KIF18B
Kinesin family member 18B.
    
 0.848
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.