STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000003736annotation not available (396 aa)    
Predicted Functional Partners:
ENSODEP00000008906
annotation not available
   
 0.990
Nae1
NEDD8 activating enzyme E1 subunit 1.
   
 0.990
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.979
MOCS2
Molybdenum cofactor synthesis 2.
  
 0.968
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.953
ENSODEP00000026090
annotation not available
    
 0.953
ENSODEP00000026680
annotation not available
    
 0.953
ENSODEP00000012352
annotation not available
   
 0.941
ENSODEP00000014978
annotation not available
   
 0.941
ENSODEP00000011568
annotation not available
    
 0.937
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.