STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A46Solute carrier family 25 member 46. (403 aa)    
Predicted Functional Partners:
MFN1
Mitofusin 1.
   
 
 0.587
MFN2
Mitofusin 2.
   
 
 0.587
OPA1
OPA1 mitochondrial dynamin like GTPase.
   
 
 0.572
ATAD1
ATPase family AAA domain containing 1.
   
 
 0.568
MARCHF5
Membrane associated ring-CH-type finger 5.
   
 
 0.526
SLC25A48
Solute carrier family 25 member 48.
      
 0.477
CHCHD3
Coiled-coil-helix-coiled-coil-helix domain containing 3.
    
 
 0.474
ENSODEP00000003916
annotation not available
   
    0.467
ENSODEP00000004173
annotation not available
    
   0.465
SLC7A6OS
Solute carrier family 7 member 6 opposite strand.
      
 0.461
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.