STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYNLYN proto-oncogene, Src family tyrosine kinase. (512 aa)    
Predicted Functional Partners:
PTK2B
Protein tyrosine kinase 2 beta.
   
0.987
ENSODEP00000009746
annotation not available
    
 0.986
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.985
FYN
FYN proto-oncogene, Src family tyrosine kinase.
  
0.977
CBLB
Cbl proto-oncogene B.
    
 0.970
SHC1
SHC adaptor protein 1.
   
 0.970
SYK
Spleen associated tyrosine kinase.
  
0.969
CD19
CD19 molecule.
   
 0.968
CD79A
CD79a molecule.
   
 0.967
FGR
FGR proto-oncogene, Src family tyrosine kinase.
  
0.966
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.