STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKAA1Protein kinase AMP-activated catalytic subunit alpha 1. (560 aa)    
Predicted Functional Partners:
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.998
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.998
ENSODEP00000005353
annotation not available
   
 0.995
ENSODEP00000022040
annotation not available
   
 0.995
PRKAG3
Protein kinase AMP-activated non-catalytic subunit gamma 3.
   
 0.993
ENSODEP00000006874
annotation not available
   
 0.992
ENSODEP00000013840
annotation not available
   
 0.992
ENSODEP00000014296
annotation not available
   
 0.992
ENSODEP00000005374
annotation not available
   
  0.987
ENSODEP00000005395
annotation not available
   
  0.987
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.