STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF236Zinc finger protein 236. (1833 aa)    
Predicted Functional Partners:
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
  0.911
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.846
ENSODEP00000003796
annotation not available
   
  
 0.824
ENSODEP00000003810
annotation not available
   
  
0.824
ENSODEP00000025351
annotation not available
    
 0.797
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.795
RANBP2
E3 SUMO-protein ligase RanBP2.
   
  0.775
NYNRIN
NYN domain and retroviral integrase containing.
    
 0.773
ENSODEP00000017540
annotation not available
   
 0.725
KDM2A
Lysine demethylase 2A.
   
 0.722
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.