STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALAS25'-aminolevulinate synthase 2. (582 aa)    
Predicted Functional Partners:
SORD
Sorbitol dehydrogenase.
  
 
 0.953
GLDC
Glycine decarboxylase.
  
 
 0.940
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.939
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.936
SHMT1
Serine hydroxymethyltransferase 1.
  
 
 0.933
PIPOX
Pipecolic acid and sarcosine oxidase.
    
 0.929
AGXT2
Alanine--glyoxylate aminotransferase 2.
    
 0.924
ALAD
Aminolevulinate dehydratase.
    
 0.924
ENSODEP00000003299
annotation not available
  
 
 0.916
LOC101589954
annotation not available
  
 
 0.916
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.