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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUTM1NUT midline carcinoma family member 1. (1100 aa)    
Predicted Functional Partners:
ENSODEP00000025351
annotation not available
    
 0.921
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
 0.886
WDR18
WD repeat domain 18.
   
 0.863
ENSODEP00000023741
annotation not available
   
 0.836
TEX10
Testis expressed 10.
    
 0.818
ENSODEP00000017540
annotation not available
    
 0.808
ELP4
Elongator acetyltransferase complex subunit 4.
    
 0.808
ENSODEP00000023924
annotation not available
   
  0.805
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1.
   
  0.805
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
    
 0.781
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.