STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX31Sorting nexin 31. (440 aa)    
Predicted Functional Partners:
VPS26B
VPS26, retromer complex component B.
    
 0.966
VPS26A
VPS26, retromer complex component A.
    
 0.966
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.941
ENSODEP00000013816
annotation not available
    
 0.910
ENSODEP00000014761
annotation not available
    
 0.910
WASHC3
WASH complex subunit 3.
    
 0.906
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
    
 0.906
WASHC5
WASH complex subunit 5.
    
 0.904
ENSODEP00000017018
annotation not available
    
 0.902
WASHC4
WASH complex subunit 4.
    
 0.897
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.