Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000004166annotation not available (124 aa)    
Predicted Functional Partners:
MRPS9
Mitochondrial ribosomal protein S9.
  
 0.997
MRPS2
Mitochondrial ribosomal protein S2.
  
 0.997
MRPS14
Mitochondrial ribosomal protein S14.
  
 0.995
MRPS11
Mitochondrial ribosomal protein S11.
  
 0.995
MRPS15
Mitochondrial ribosomal protein S15.
  
 0.994
ENSODEP00000026161
annotation not available
  
 0.993
MRPS5
Mitochondrial ribosomal protein S5.
  
 0.992
MRPS12
Mitochondrial ribosomal protein S12.
  
 0.992
MRPS34
Mitochondrial ribosomal protein S34.
   
 0.989
ENSODEP00000024489
annotation not available
   
 0.989
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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