STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TWSG1Twisted gastrulation BMP signaling modulator 1. (223 aa)    
Predicted Functional Partners:
CHRD
Chordin.
    
 
 0.889
BMP2
Bone morphogenetic protein 2.
   
 
 0.689
BMP4
Bone morphogenetic protein 4.
   
 
 0.689
GDF7
Growth differentiation factor 7.
   
 
 0.624
TFR2
Transferrin receptor 2.
      
 0.544
ENSODEP00000026051
annotation not available
      
 0.532
BMP5
Bone morphogenetic protein 5.
   
 
 0.515
BMP6
Bone morphogenetic protein 6.
   
 
 0.510
CHRDL2
Chordin like 2.
      
 0.478
BMP7
Bone morphogenetic protein 7.
   
 
 0.478
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.