STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPN2GPN-loop GTPase 2. (287 aa)    
Predicted Functional Partners:
GPN1
GPN-loop GTPase 1.
    
 
0.980
ENSODEP00000010090
annotation not available
    
 0.966
ENSODEP00000010785
annotation not available
    
 0.966
POLR2B
RNA polymerase II subunit B.
    
 
 0.961
POLR2C
RNA polymerase II subunit C.
  
 
 0.961
ITSN1
Intersectin 1.
    
 0.953
ENSODEP00000025351
annotation not available
   
 0.940
ENSODEP00000011504
annotation not available
    
 
 0.912
ENSODEP00000021255
annotation not available
    
 
 0.912
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 0.909
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.