Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000004366annotation not available (429 aa)    
Predicted Functional Partners:
CDH11
Cadherin 11.
      
 0.591
ENSODEP00000020189
annotation not available
      
 0.546
MT3
Metallothionein 3.
      
 0.528
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
      
 0.467
ENSODEP00000002969
annotation not available
      
 0.458
ENSODEP00000014606
annotation not available
      
 0.458
ENSODEP00000021354
annotation not available
      
 0.429
ENSODEP00000021638
annotation not available
      
 0.429
CDH7
Cadherin 7.
      
 0.405
CDH8
Cadherin 8.
      
 0.405
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.