STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN6Protein tyrosine phosphatase non-receptor type 6. (597 aa)    
Predicted Functional Partners:
CD22
CD22 molecule.
   
 0.995
INPPL1
Inositol polyphosphate phosphatase like 1.
   
0.994
GAB1
GRB2 associated binding protein 1.
    
 0.993
SYK
Spleen associated tyrosine kinase.
   
 0.991
LOC101563936
annotation not available
   
0.987
ENSODEP00000013691
annotation not available
   
0.987
KLRG1
Killer cell lectin like receptor G1.
    
 0.986
CD72
CD72 molecule.
   
 0.983
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.981
PDGFRB
Platelet derived growth factor receptor beta.
   
 0.978
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.