STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000004397annotation not available (143 aa)    
Predicted Functional Partners:
HIBCH
3-hydroxyisobutyryl-CoA hydrolase.
  
 0.839
ENSODEP00000003855
annotation not available
    
   0.783
ENSODEP00000023217
annotation not available
    
   0.783
C12orf10
Chromosome 12 open reading frame 10.
   
   0.782
CRYL1
Crystallin lambda 1.
  
 
 0.778
ENSODEP00000020336
annotation not available
    
 0.755
ENSODEP00000025105
annotation not available
    
 0.755
ACADVL
acyl-CoA dehydrogenase very long chain.
  
 
 0.734
SUCLG1
succinate-CoA ligase alpha subunit.
    
  0.725
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
    
   0.724
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.