STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC1DnaJ heat shock protein family (Hsp40) member C1. (513 aa)    
Predicted Functional Partners:
ENSODEP00000017298
annotation not available
   
 
 0.989
TADA3
Transcriptional adaptor 3.
    
 0.977
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.973
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
    
 0.970
SGF29
SAGA complex associated factor 29.
    
 0.970
MBIP
MAP3K12 binding inhibitory protein 1.
    
 0.952
TADA2B
Transcriptional adaptor 2B.
    
 0.946
TADA2A
Transcriptional adaptor 2A.
    
 0.946
COMMD2
COMM domain containing 2.
    
 0.939
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
   
0.933
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.