STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAS8Growth arrest specific 8. (478 aa)    
Predicted Functional Partners:
COASY
Coenzyme A synthase.
    
 0.954
DNALI1
Dynein axonemal light intermediate chain 1.
  
 
 
 0.933
CCDC65
Coiled-coil domain containing 65.
  
 
 
 0.915
MLX
MAX dimerization protein MLX.
     
 0.807
RSPH3
Radial spoke head 3.
  
 
 
 0.805
PANK4
Pantothenate kinase 4 (inactive).
     
 0.799
ENSODEP00000002162
annotation not available
     
 0.790
PPCS
Phosphopantothenoylcysteine synthetase.
     
 0.790
COX19
Cytochrome c oxidase assembly factor COX19.
     
 0.790
PPCDC
Phosphopantothenoylcysteine decarboxylase.
     
 0.790
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.