STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000004581annotation not available (258 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.993
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.988
DAB1
DAB adaptor protein 1.
    
 0.983
APOE
Apolipoprotein E.
    
 0.972
CLU
Clusterin.
    
 0.966
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.962
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.962
LPL
Lipoprotein lipase.
    
 0.960
MYLIP
Myosin regulatory light chain interacting protein.
    
 0.953
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.953
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.