STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRTM2Leucine rich repeat transmembrane neuronal 2. (517 aa)    
Predicted Functional Partners:
ENSODEP00000001748
annotation not available
    
 0.936
NRXN3
Neurexin 3.
    
 0.936
NRXN2
Neurexin 2.
    
 0.922
ENSODEP00000001837
annotation not available
    
 0.918
ENSODEP00000001769
annotation not available
    
 0.856
ENSODEP00000025351
annotation not available
    
 0.841
TMEM38B
Transmembrane protein 38B.
    
   0.805
NTNG1
Netrin G1.
    
 0.793
Tonsl
Tonsoku like, DNA repair protein.
   
 0.745
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.727
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.