STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR3Carbonyl reductase 3. (277 aa)    
Predicted Functional Partners:
UGT1A6
UDP glucuronosyltransferase family 1 member A6.
    
 0.904
MRE11
MRE11 homolog, double strand break repair nuclease.
   
 0.900
FDX1
Ferredoxin 1.
  
 0.887
ENSODEP00000022634
annotation not available
  
 0.887
STOML1
Stomatin like 1.
  
 0.882
MED14
Mediator complex subunit 14.
    
 0.875
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.871
DCXR
Dicarbonyl and L-xylulose reductase.
    
 0.869
ENSODEP00000000101
annotation not available
    
 0.859
MCAT
malonyl-CoA-acyl carrier protein transacylase.
  
 0.856
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.