STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL6IP6ADP ribosylation factor like GTPase 6 interacting protein 6. (225 aa)    
Predicted Functional Partners:
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.830
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
   0.830
RFTN2
Raftlin family member 2.
      
 0.541
PLBD2
Phospholipase B domain containing 2.
      
 0.538
FAM177A1
Family with sequence similarity 177 member A1.
      
 0.532
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.530
ENSODEP00000002738
annotation not available
      
 0.477
ENSODEP00000022941
annotation not available
      
 0.477
SDS
Serine dehydratase.
      
 0.457
CRTC2
CREB regulated transcription coactivator 2.
    
   0.456
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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