STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000004643annotation not available (403 aa)    
Predicted Functional Partners:
CLIC5
Chloride intracellular channel 5.
   
   0.981
CLIC4
Chloride intracellular channel 4.
   
 
 0.970
TPRN
Taperin.
    
 0.966
CLIC2
Chloride intracellular channel 2.
   
 
 0.866
GSR
Glutathione-disulfide reductase.
     
 0.838
MYO7A
Myosin VIIA.
     
 0.803
MYO7B
Myosin VIIB.
     
 0.803
ENSODEP00000000084
annotation not available
   
 0.802
ENSODEP00000013045
annotation not available
   
 0.802
ENSODEP00000006338
annotation not available
     
 0.785
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.