Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FKBP11FKBP prolyl isomerase 11. (200 aa)    
Predicted Functional Partners:
SSR2
Signal sequence receptor subunit 2.
   
 
 0.925
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.921
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
   
 
 0.880
SSR4
Signal sequence receptor subunit 4.
   
 
 0.865
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 
 0.852
CCDC134
Coiled-coil domain containing 134.
    
 0.841
RPN2
Ribophorin II.
   
 
 0.836
RPN1
Ribophorin I.
   
 
 0.828
SEC61B
SEC61 translocon beta subunit.
   
   0.826
TMEM258
Transmembrane protein 258.
   
   0.816
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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