STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP11FKBP prolyl isomerase 11. (200 aa)    
Predicted Functional Partners:
RYR3
Ryanodine receptor 3.
    
 0.852
RYR2
Ryanodine receptor 2.
    
 0.852
RYR1
Ryanodine receptor 1.
    
 0.852
MYO3A
Myosin IIIA.
    
 0.806
MYO3B
Myosin IIIB.
    
 0.806
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.742
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.702
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 0.692
ENSODEP00000018854
annotation not available
   
 
 0.686
ENSODEP00000021380
annotation not available
   
 
 0.686
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.