STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf232Chromosome 1 open reading frame 230. (188 aa)    
Predicted Functional Partners:
C10orf143
Chromosome 10 open reading frame 143.
      
 0.580
KIFC3
Kinesin family member C3.
      
 0.545
KIFC1
Kinesin family member C1.
      
 0.545
BTBD8
BTB domain containing 8.
      
 0.539
RPRM
Reprimo, TP53 dependent G2 arrest mediator homolog.
      
 0.537
ASXL2
ASXL transcriptional regulator 2.
      
 0.534
KIFC2
Kinesin family member C2.
      
 0.532
FAM240A
Family with sequence similarity 240 member A.
  
   
 0.514
ENSODEP00000015945
annotation not available
      
 0.441
ENSODEP00000026313
annotation not available
      
 0.441
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.