STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEPH1Ventricular zone expressed PH domain containing 1. (811 aa)    
Predicted Functional Partners:
ENSODEP00000001130
annotation not available
      
 0.555
MEGF11
Multiple EGF like domains 11.
      
 0.545
SLC16A4
Solute carrier family 16 member 4.
      
 0.537
ENSODEP00000008445
annotation not available
      
 0.529
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.479
PTAFR
Platelet activating factor receptor.
      
 0.478
C4orf45
Chromosome 4 open reading frame 45.
      
 0.436
CIT
Citron rho-interacting serine/threonine kinase.
      
 0.420
MEGF10
Multiple EGF like domains 10.
      
 0.410
LRRC4
Leucine rich repeat containing 4.
      
 0.407
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.