STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000004930annotation not available (199 aa)    
Predicted Functional Partners:
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.939
PIWIL1
Piwi like RNA-mediated gene silencing 1.
   
 0.939
PIWIL4
Piwi like RNA-mediated gene silencing 4.
   
 0.930
DICER1
Dicer 1, ribonuclease III.
  
 
 0.888
DDX6
DEAD-box helicase 6.
   
 0.876
ENSODEP00000017793
annotation not available
   
 0.876
DHX9
DExH-box helicase 9.
   
 0.866
AGO3
Protein argonaute-3.
    
 0.841
AGO1
Argonaute RISC component 1.
    
 0.841
AGO4
Argonaute RISC component 4.
    
 0.841
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.