Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000005000annotation not available (270 aa)    
Predicted Functional Partners:
DCXR
Dicarbonyl and L-xylulose reductase.
   
 0.920
SPR
Sepiapterin reductase.
     
 0.911
ENSODEP00000003480
annotation not available
  
 0.904
ENSODEP00000013939
annotation not available
  
 0.904
PTGES
Prostaglandin E synthase.
     
 0.891
PTS
6-pyruvoyltetrahydropterin synthase.
    
 0.890
UGT1A6
UDP glucuronosyltransferase family 1 member A6.
    
 0.883
ENSODEP00000000101
annotation not available
    
 0.877
PTGES2
Prostaglandin E synthase 2.
     
 0.876
HPGD
15-hydroxyprostaglandin dehydrogenase.
     
 0.875
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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