STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGAPhosphatidylinositol glycan anchor biosynthesis class A. (484 aa)    
Predicted Functional Partners:
PIGP
Phosphatidylinositol glycan anchor biosynthesis class P.
    
 0.992
PIGC
Phosphatidylinositol glycan anchor biosynthesis class C.
   
 0.992
ENSODEP00000019155
annotation not available
    
 0.986
PIGQ
Phosphatidylinositol glycan anchor biosynthesis class Q.
    
 0.985
DPM2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
    
 0.974
ENSODEP00000015704
annotation not available
  
 0.967
ENSODEP00000017800
annotation not available
  
 0.967
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.960
CTU2
Cytosolic thiouridylase subunit 2.
   
 0.955
ENSODEP00000012201
annotation not available
   
 0.955
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.