STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPCAT3Lysophosphatidylcholine acyltransferase 3. (487 aa)    
Predicted Functional Partners:
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
     
 0.981
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
     
 0.981
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.981
CHPT1
Choline phosphotransferase 1.
   
 
 0.977
PEMT
Phosphatidylethanolamine N-methyltransferase.
     
 0.976
PISD
Phosphatidylserine decarboxylase.
     
 0.975
PTDSS1
Phosphatidylserine synthase 1.
     
 0.975
PTDSS2
Phosphatidylserine synthase 2.
     
 0.975
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
     
 0.973
SELENOI
Selenoprotein I.
   
 
 0.972
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.