Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MND1Meiotic nuclear divisions 1. (205 aa)    
Predicted Functional Partners:
PSMC3IP
PSMC3 interacting protein.
   
 0.997
RAD51
RAD51 recombinase.
   
 0.965
PBK
PDZ binding kinase.
   
 
 0.888
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.887
DMC1
DNA meiotic recombinase 1.
   
 0.886
RAD51C
RAD51 paralog C.
   
 0.874
RAD51B
RAD51 paralog B.
   
 0.873
RAD51D
RAD51 paralog D.
   
 0.873
NCAPG
non-SMC condensin I complex subunit G.
   
  
 0.867
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
  
 0.862
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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