STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN11UBX domain protein 11. (481 aa)    
Predicted Functional Partners:
ENSODEP00000017298
annotation not available
    
 
 0.975
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.970
SPATA5
Spermatogenesis associated 5.
   
 0.962
VCP
Valosin containing protein.
   
 0.962
UBXN6
UBX domain protein 6.
    
 0.958
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.956
PLAA
Phospholipase A2 activating protein.
    
 
 0.933
YOD1
YOD1 deubiquitinase.
   
 
 0.929
NVL
Nuclear VCP like.
   
 0.926
UBXN8
UBX domain protein 8.
    
 0.915
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.