STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLG2Discs large MAGUK scaffold protein 2. (870 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.991
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
 0.985
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
    
 0.985
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.984
CASK
Calcium/calmodulin dependent serine protein kinase.
   
0.977
LIN7C
Lin-7 homolog C, crumbs cell polarity complex component.
   
0.973
LLGL1
LLGL scribble cell polarity complex component 1.
    
 0.966
LLGL2
LLGL scribble cell polarity complex component 2.
    
 0.966
DLGAP1
DLG associated protein 1.
    
 0.962
LIN7B
Lin-7 homolog B, crumbs cell polarity complex component.
   
0.961
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.