STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000005752annotation not available (50 aa)    
Predicted Functional Partners:
TAF4
TATA-box binding protein associated factor 4.
    
 0.999
TAF8
TATA-box binding protein associated factor 8.
    
 0.999
TAF11
TATA-box binding protein associated factor 11.
   
 0.999
Taf1
TATA-box binding protein associated factor 1.
    
 0.998
TAF5
TATA-box binding protein associated factor 5.
    
 0.998
TAF10
TATA-box binding protein associated factor 10.
    
 0.998
TAF6
TATA-box binding protein associated factor 6.
    
 0.998
TBP
TATA-box binding protein.
    
 0.997
TAF2
TATA-box binding protein associated factor 2.
    
 0.996
TAF4B
TATA-box binding protein associated factor 4b.
    
 0.996
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.