STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD11Ankyrin repeat domain 11. (2634 aa)    
Predicted Functional Partners:
KDM6B
Lysine demethylase 6B.
  
 0.876
KDM6A
Lysine demethylase 6A.
  
 0.852
PNKP
Polynucleotide kinase 3'-phosphatase.
   
 
 0.848
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.846
ENSODEP00000009135
annotation not available
   
 0.813
ENSODEP00000011897
annotation not available
   
 0.813
EP400
E1A binding protein p400.
   
 0.791
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.791
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
  0.762
ECI2
enoyl-CoA delta isomerase 2.
    
 0.760
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.